cl-string-match
2021-12-09
Provides implementations of the standard sub-string search (string matching) algorithms: brute-force, Boyer-Moore, Rabin-Karp, etc.
Upstream URL
Author
License
CL-STRING-MATCH aims at providing robust implementations of string matching algorithms. These algorithms are also called "substring search" or "subsequence search" algorithms.
Currently it provides implementations of the following string matching algorithms (see wiki for details):
- Brute-force (also known as naïve algorithm)
- Boyer-Moore (with mismatched character heuristic and good suffix shift)
- Boyer-Moore-Horspool algorithm
- Knuth-Morris-Pratt algorithm
- Rabin-Karp algorithm
- Shift-OR algorithm (single pattern)
- Aho-Corasick algorithm (with finite set of patterns, forward transition and fail function)
- A simple backtracking regular expressions engine re similar to that of the Lua programming language. At the moment it significantly underperforms compared to the CL-PPCRE.
Some string processing algorithms are also implemented:
- Simple (naїve) suffix tree construction algorithm
- Ukkonen's suffix tree construction algorithm
Data structures:
- Prefix trie
- Suffix tree
Utilities:
- Testing whether a string has the given suffix or prefix (starts with or ends with the pattern)
Some algorithms (Brute-force, Boyer-Moore-Horspool) have parametric implementations (code templates) making it possible to declare specific implementations for application-specific custom data types and data structures.
This library is routinely tested on Steel Bank CL, Clozure CL, Embeddable CL and Armed Bear CL. Chances are really high that it will work on other platforms without problems (check its status on CL-TEST-GRID).
Check the API Reference for more details.
Additional resources:
- Project home page
- Also take a look at the project Wiki
- A mirror on SourceForge
RATIONALE
Since the standard search
function is working fine, one might ask:
why do we need a yet another implementation? Answer is simple:
advanced algorithms offer different benefits compared to the standard
implementation that is based on the brute-force algorithm.
Benchmarks
show that depending on environment and pattern of application, a
Boyer-Moore-Horspool algorithm implementation can outperform standard
search function in SBCL by almost 18 times! Check the code in the
bench
folder for further details.
USAGE
CL-STRING-MATCH is supported by Quicklisp and is known by its system name:
(ql:quickload :cl-string-match)
CL-STRING-MATCH exports functions in cl-string-match
package (that
is also nicknamed as sm
).
Shortcut functions search given pattern pat
in text txt
. They are
usually much slower (because they build index structures every time
they are called) but are easier to use:
string-contains-brute
pat txt — Brute-forcestring-contains-bm
pat txt — Boyer-Moorestring-contains-bmh
pat txt — Boyer-Moore-Horspoolstring-contains-kmp
pat txt — Knuth-Morris-Prattstring-contains-ac
pat txt — Aho-Corasickstring-contains-rk
pat txt — Rabin-Karp
A more robust approach is to use pre-calculated index data that is
processed by a pair of initialize
and search
functions:
initialize-bm
pat andsearch-bm
bm txtinitialize-bmh
pat andsearch-bmh
bm txtinitialize-bmh8
pat andsearch-bmh8
bm txtinitialize-rk
pat andsearch-rk
rk txtinitialize-kmp
pat andsearch-kmp
kmp txtinitialize-ac
pat andsearch-ac
ac txt.initialize-ac
can accept a list of patterns that are compiled into a trie.
Brute-force algorithm does not use pre-calculated data and has no "initialize" function.
Boyer-Moore-Horspool implementation (the -BMH
and -BMH8
functions)
also accepts :start2
and :end2
keywords for the "search" and
"contains" functions.
Following example looks for a given substring pat in a given line of text txt using Boyer-Moore-Horspool algorithm implementation:
(let ((idx (initialize-bmh "abc"))) (search-bmh idx "ababcfbgsldkj"))
Counting all matches of a given pattern in a string:
(loop with str = "____abc____abc____ab" with pat = "abc" with idx = (sm:initialize-bmh8 pat) with z = 0 with s = 0 while s do (when (setf s (sm:search-bmh8 idx str :start2 s)) (incf z) (incf s (length pat))) finally (return z))
It should be noted that Boyer-Moore-Horspool (bmh
) implementation
can offer an order of magnitude boost to performance compared to the
standard search
function.
However, some implementations create a "jump table" that can be the
size of the alphabet (over 1M CHAR-CODE-LIMIT on implementations
supporting Unicode) and thus consume a significant chunk of
memory. There are different solutions to this problem and at the
moment a version for the ASCII strings is offered: initialize-bmh8
pat and search-bmh8
bm txt as well as string-contains-bmh8
pat txt work for strings with characters inside the 256 char code
limit.
CONTRIB
This project also contains code that is not directly invloved with the pattern search algorithms but nevertheless might be found useful for text handling/processing. Check the contrib folder in the repository for more details. Currently it contains:
ascii-strings.lisp
aims to provide single-byte strings
functionality for Unicode-enabled Common Lisp implementations. Another
goal is to reduce memory footprint and boost performance of the
string-processing tasks, i.e. read-line
.
simple-scanf
implements a subset of the original POSIX standard
scanf(3)
function features.
TODO
The project still lacks some important features and is under constant development. Any kind of contributions or feedback are welcome.
Please take a look at the list of open issues or the Project Roadmap.
Visit project Wiki for additional information.