A cytoscape widget for Common Lisp Jupyter.

cytoscape-clj

# cytoscape-clj

A [common-lisp-jupyter][] widget for [cytoscape.js][].

## Installation

The Jupyter Lab frontend code should be installed using the following command:

```
jupyter-labextension install cytoscape-clj
```

Once the extension has been installed then widget can be loaded in a notebook
using Quicklisp.

```lisp
(ql:quickload :cytoscape-clj)
```

## Usage

For sample notebooks please see the examples directory. The main widgets are
`cytoscape-widget` and `element`. For example to create and display a graph
use the following.

```lisp
(make-instance 'cytoscape:cytoscape-widget
               :graph-layouts (list (make-instance 'cytoscape:cose-layout))
               :graph-style "node { label: data(id); }"
               :elements (list (make-instance 'cytoscape:element
                                              :group "nodes"
                                              :data `(:object-alist
                                                      ("id" . "a")))
                               (make-instance 'cytoscape:element
                                              :group "nodes"
                                              :data `(:object-alist
                                                      ("id" . "b")))
                               (make-instance 'cytoscape:element
                                              :group "nodes"
                                              :data `(:object-alist
                                                      ("id" . "c")))
                               (make-instance 'cytoscape:element
                                              :group "edges"
                                              :data `(:object-alist
                                                      ("source" . "a")
                                                      ("target" . "b")))
                               (make-instance 'cytoscape:element
                                              :group "edges"
                                              :data `(:object-alist
                                                      ("source" . "a")
                                                      ("target" . "c")))
                               (make-instance 'cytoscape:element
                                              :group "edges"
                                              :data `(:object-alist
                                                      ("source" . "b")
                                                      ("target" . "c")))))
```

[common-lisp-jupyter]: https://yitzchak.github.io/common-lisp-jupyter/ 
[cytoscape.js]: https://js.cytoscape.org/


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